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    ZUP1 zinc finger containing ubiquitin peptidase 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 533724, updated on 30-Jan-2025

    Summary

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    Official Symbol
    ZUP1provided by VGNC
    Official Full Name
    zinc finger containing ubiquitin peptidase 1provided by VGNC
    Primary source
    VGNC:VGNC:37389
    See related
    BGD:BT13019; EnsemblRapid:ENSBTAG00070005137
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    DUB; ZUFSP; C6orf113; C9H6orf113
    Orthologs
    human mouse all
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    Genomic context

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    See ZUP1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (33924582..33949380)

    Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 162 member B Neighboring gene karyopherin subunit alpha 5 Neighboring gene radial spoke head component 4A Neighboring gene transmembrane protein 230

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC129029

    General protein information

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    Preferred Names
    zinc finger-containing ubiquitin peptidase 1
    Names
    lys-63-specific deubiquitinase ZUFSP
    ubiquitin carboxyl-terminal hydrolase ZUFSP
    zinc finger with UFM1 specific peptidase domain
    zinc finger with UFM1-specific peptidase domain protein
    NP_001029766.1
    XP_005210803.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034594.1 → NP_001029766.1  zinc finger-containing ubiquitin peptidase 1

      Status: PROVISIONAL

      Source sequence(s)
      BC104595
      UniProtKB/Swiss-Prot
      Q3SWY8
      UniProtKB/TrEMBL
      A0AAA9TGL3
      Related
      ENSBTAP00070006634.1, ENSBTAT00070011761.1
      Conserved Domains (1) summary
      pfam07910
      Location:337 → 552
      Peptidase_C78; Peptidase family C78

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      33924582..33949380
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005210746.5 → XP_005210803.2  zinc finger-containing ubiquitin peptidase 1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9TGL3, G5E563
      Conserved Domains (1) summary
      pfam07910
      Location:337 → 552
      Peptidase_C78; Peptidase family C78
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3SWY8.1 GenPept UniProtKB/Swiss-Prot:Q3SWY8

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