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    SLC38A7 solute carrier family 38 member 7 [ Bos taurus (domestic cattle) ]

    Gene ID: 513110, updated on 1-Jan-2025

    Summary

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    Official Symbol
    SLC38A7provided by VGNC
    Official Full Name
    solute carrier family 38 member 7provided by VGNC
    Primary source
    VGNC:VGNC:34854
    See related
    BGD:BT27310; Ensembl:ENSBTAG00000007170
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See SLC38A7 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (26429233..26442437, complement)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene CCR4-NOT transcription complex subunit 1 Neighboring gene small nucleolar RNA SNORA46 Neighboring gene small nucleolar RNA SNORA50 Neighboring gene glutamic-oxaloacetic transaminase 2 Neighboring gene peptidyl-prolyl cis-trans isomerase A-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-asparagine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-glutamine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in amino acid transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium-coupled neutral amino acid transporter 7
    Names
    amino acid transporter
    putative sodium-coupled neutral amino acid transporter 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100355.1 → NP_001093825.1  sodium-coupled neutral amino acid transporter 7

      See identical proteins and their annotated locations for NP_001093825.1

      Status: PROVISIONAL

      Source sequence(s)
      BT030716
      UniProtKB/Swiss-Prot
      A7E3U5
      Related
      ENSBTAP00000009438.4, ENSBTAT00000009438.5
      Conserved Domains (1) summary
      cl00456
      Location:56 → 458
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      26429233..26442437 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005218544.5 → XP_005218601.1  sodium-coupled neutral amino acid transporter 7 isoform X1

      See identical proteins and their annotated locations for XP_005218601.1

      UniProtKB/Swiss-Prot
      A7E3U5
      Conserved Domains (1) summary
      cl00456
      Location:56 → 458
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    2. XM_059876658.1 → XP_059732641.1  sodium-coupled neutral amino acid transporter 7 isoform X1

      UniProtKB/Swiss-Prot
      A7E3U5
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A7E3U5.1 GenPept UniProtKB/Swiss-Prot:A7E3U5

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