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    FAHD1 fumarylacetoacetate hydrolase domain containing 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 509273, updated on 27-Dec-2024

    Summary

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    Official Symbol
    FAHD1provided by VGNC
    Official Full Name
    fumarylacetoacetate hydrolase domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:28708
    See related
    BGD:BT23917; Ensembl:ENSBTAG00000033015
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See FAHD1 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (1392519..1394143)

    Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene insulin like growth factor binding protein acid labile subunit Neighboring gene hydroxyacylglutathione hydrolase Neighboring gene meiosis specific with OB-fold Neighboring gene uncharacterized LOC112444337

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acetylpyruvate hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    oxaloacetate tautomerase FAHD1, mitochondrial
    Names
    OAA decarboxylase
    acylpyruvase FAHD1, mitochondrial
    fumarylacetoacetate hydrolase domain-containing protein 1
    oxaloacetate decarboxylase
    oxaloacetate decarboxylase, mitochondrial
    NP_001068868.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075400.1 → NP_001068868.1  oxaloacetate tautomerase FAHD1, mitochondrial

      See identical proteins and their annotated locations for NP_001068868.1

      Status: VALIDATED

      Source sequence(s)
      BC113240
      UniProtKB/Swiss-Prot
      Q2HJ98
      UniProtKB/TrEMBL
      A0AAA9SMK6
      Related
      ENSBTAP00000044120.3, ENSBTAT00000046873.5
      Conserved Domains (2) summary
      COG0179
      Location:16 → 220
      MhpD; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport and catabolism]
      pfam01557
      Location:18 → 216
      FAA_hydrolase; Fumarylacetoacetate (FAA) hydrolase family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      1392519..1394143
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2HJ98.1 GenPept UniProtKB/Swiss-Prot:Q2HJ98

    Gene LinkOut

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