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    CG17600 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33141, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG17600provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031195
    Locus tag
    Dmel_CG17600
    See related
    AllianceGenome:FB:FBgn0031195
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG17602; Dmel\CG17600
    Summary
    Predicted to be located in membrane. Is expressed in several structures, including embryonic dorsal epidermis; embryonic epipharynx; embryonic hypopharynx; embryonic ventral epidermis; and gut section. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG17600 in Genome Data Viewer
    Location:
    20C1-20C1; 1-66 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (22515197..22542024)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (21917033..21943860)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43493 Neighboring gene lethal (1) G0196 Neighboring gene long non-coding RNA:CR43962 Neighboring gene Ribosomal protein S6 kinase II Neighboring gene uncharacterized protein Neighboring gene Clusterin associated protein 1 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. circRNA biogenesis competes with pre-mRNA splicing. Ashwal-Fluss R, et al. Mol Cell, 2014 Oct 2. PMID 25242144
    2. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article
    3. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    5. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    mobile_element

    • Loc: 22516607-22517542 mobile_element_type = transposon:INE-1{}2444
    • Loc: 22523565-22523685 mobile_element_type = transposon:NOF{}CG17600-FB-NOF

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17600-PA
    CG17600-PB
    CG17600-PC
    CG17600-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      22515197..22542024
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134625.3 → NP_608469.1  uncharacterized protein Dmel_CG17600, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608469.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TL7, Q9VR60
      Related
      FBpp0077050
      Conserved Domains (1) summary
      pfam04103
      Location:227 → 306
      CD20; CD20-like family

    2. NM_001272849.1 → NP_001259778.1  uncharacterized protein Dmel_CG17600, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259778.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PJS6
      Conserved Domains (1) summary
      pfam04103
      Location:227 → 306
      CD20; CD20-like family

    3. NM_167787.2 → NP_728465.1  uncharacterized protein Dmel_CG17600, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728465.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VR63
      Related
      FBpp0077051

    4. NM_001272848.1 → NP_001259777.1  uncharacterized protein Dmel_CG17600, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259777.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VR63
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PJS6 M9PJS6
    Q9VR60 Q9VR60
    Q9VR63 Q9VR63

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