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    Cnep1r1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3355167, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Cnep1r1provided by FlyBase
    Official Full Name
    CTD nuclear envelope phosphatase 1 regulatory subunit 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0069938
    Locus tag
    Dmel_CG41106
    See related
    AllianceGenome:FB:FBgn0069938
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG41106; Dmel\CG41106; Nep1r1; NepIrI
    Summary
    Predicted to enable protein phosphatase activator activity. Is active in endoplasmic reticulum membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Cnep1r1 in Genome Data Viewer
    Location:
    20F2-20F2; 1-66 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (22945321..22946339)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (22347157..22348175)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR41352 Neighboring gene long non-coding RNA:CR45502 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Piwi Is Required during Drosophila Embryogenesis to License Dual-Strand piRNA Clusters for Transposon Repression in Adult Ovaries. Akkouche A, et al. Mol Cell, 2017 May 4. PMID 28457744
    2. Torsin and NEP1R1-CTDNEP1 phosphatase affect interphase nuclear pore complex insertion by lipid-dependent and lipid-independent mechanisms. Jacquemyn J, et al. EMBO J, 2021 Sep 1. PMID 34313336, Free PMC Article
    3. Recurrent insertion and duplication generate networks of transposable element sequences in the Drosophila melanogaster genome. Bergman CM, et al. Genome Biol, 2006. PMID 17134480, Free PMC Article
    4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables protein phosphatase activator activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of nuclear membrane biogenesis IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Nem1-Spo7 phosphatase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Nem1-Spo7 phosphatase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of protein serine/threonine phosphatase complex TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CTD nuclear envelope phosphatase 1 regulatory subunit 1
    Names
    CG41106-PA
    Cnep1r1-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      22945321..22946339
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001042844.2 → NP_001036309.1  CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036309.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5LJU1
      Conserved Domains (1) summary
      pfam09771
      Location:4 → 121
      Tmemb_18A; Transmembrane protein 188
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5LJU1 Q5LJU1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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