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    CG13585 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37918, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13585provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035020
    Locus tag
    Dmel_CG13585
    See related
    AllianceGenome:FB:FBgn0035020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:AT28250; Dmel\CG13585
    Summary
    Predicted to be active in endoplasmic reticulum. Is expressed in embryonic/larval garland cell; garland cell primordium; and organism. Orthologous to human SMIM14 (small integral membrane protein 14). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13585 in Genome Data Viewer
    Location:
    60D4-60D4; 2-107 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (24531594..24533391)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (20419117..20420914)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene BRCA2, DNA repair associated Neighboring gene Ionotropic receptor 60e Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Ion transport peptide

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Landscape of the DNA Transposons in the Genome of the Horezu_LaPeri Strain of Drosophila melanogaster. Bologa AM, et al. Insects, 2023 May 25. PMID 37367310, Free PMC Article
    2. Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization. Menoret D, et al. Genome Biol, 2013 Aug 23. PMID 23972280, Free PMC Article
    3. Genome-wide features of neuroendocrine regulation in Drosophila by the basic helix-loop-helix transcription factor DIMMED. Hadžić T, et al. Nucleic Acids Res, 2015 Feb 27. PMID 25634895, Free PMC Article
    4. Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. Blanco E, et al. BMC Dev Biol, 2010 Sep 2. PMID 20813047, Free PMC Article
    5. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13585-PA
    CG13585-PB
    CG13585-PC
    CG13585-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      24531594..24533391
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_138084.4 → NP_611928.1  uncharacterized protein Dmel_CG13585, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611928.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8W6, Q8MZ72
      Related
      FBpp0072210
      Conserved Domains (1) summary
      pfam11027
      Location:2 → 99
      DUF2615; Protein of unknown function (DUF2615)

    2. NM_001169820.2 → NP_001163291.1  uncharacterized protein Dmel_CG13585, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163291.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8W6, Q8MZ72
      Conserved Domains (1) summary
      pfam11027
      Location:2 → 99
      DUF2615; Protein of unknown function (DUF2615)

    3. NM_166676.2 → NP_726458.1  uncharacterized protein Dmel_CG13585, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_726458.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8W6, Q8MZ72
      Related
      FBpp0072211
      Conserved Domains (1) summary
      pfam11027
      Location:2 → 99
      DUF2615; Protein of unknown function (DUF2615)

    4. NM_001169821.2 → NP_001163292.1  uncharacterized protein Dmel_CG13585, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163292.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8W6, Q8MZ72
      Conserved Domains (1) summary
      pfam11027
      Location:2 → 99
      DUF2615; Protein of unknown function (DUF2615)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0E8W6 Q0E8W6
    Q8MZ72 Q8MZ72

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