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    ect ectodermal [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 44135, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ectprovided by FlyBase
    Official Full Name
    ectodermalprovided by FlyBase
    Primary source
    FLYBASE:FBgn0000451
    Locus tag
    Dmel_CG6611
    See related
    AllianceGenome:FB:FBgn0000451
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG11965; CG6611; Difl; Dmel\CG6611; DROECT; Ifl
    Summary
    Involved in cuticle development and tube development. Is expressed in several structures, including embryonic anal pad; embryonic head epidermis; embryonic hypopharynx; epidermis; and gut section. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See ect in Genome Data Viewer
    Location:
    67D10-67D10; 3-32 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (10190276..10201837, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (10183376..10194937, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene defective proboscis extension response 10 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene long non-coding RNA:CR44538 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular and developmental analyses of the protein encoded by the Drosophila gene ectodermal. Raha D, et al. Dev Genet, 1990. PMID 2090376
    2. DNA homology between the 3'-untranslated regions of a developmentally regulated Drosophila gene and a mouse alpha-interferon gene. Nakanishi Y, et al. Gene, 1986. PMID 3026929
    3. An Ichor-dependent apical extracellular matrix regulates seamless tube shape and integrity. Rosa JB, et al. PLoS Genet, 2018 Jan. PMID 29309404, Free PMC Article
    4. Effect of heritable symbionts on maternally-derived embryo transcripts. Mateos M, et al. Sci Rep, 2019 Jun 20. PMID 31222094, Free PMC Article
    5. The Gene Expression Program for the Formation of Wing Cuticle in Drosophila. Sobala LF, et al. PLoS Genet, 2016 May. PMID 27232182, Free PMC Article

    See all (36) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cuticle development IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in tube development IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    NOT located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ectodermal
    Names
    CG6611-PA
    CG6611-PB
    CG6611-PD
    CG6611-PE
    CG6611-PF
    Interferon-like protein
    ect-PA
    ect-PB
    ect-PD
    ect-PE
    ect-PF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      10190276..10201837 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079967.6 → NP_524706.2  ectodermal, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524706.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      F0JAP6, Q7K1N5
      Related
      FBpp0076034

    2. NM_001274748.1 → NP_001261677.1  ectodermal, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261677.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F0JAP6, M9PHZ2

    3. NM_168400.3 → NP_729596.1  ectodermal, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_729596.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F0JAP6, Q7K1N5
      Related
      FBpp0076036

    4. NM_001300090.1 → NP_001287019.1  ectodermal, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287019.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F0JAP6, X2JAX9

    5. NM_168401.3 → NP_729597.2  ectodermal, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_729597.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86NQ6, Q8IQD9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PHZ2 M9PHZ2
    Q7K1N5 Q7K1N5
    Q8IQD9 Q8IQD9
    X2JAX9 X2JAX9

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