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    CA13 carbonic anhydrase 13 [ Bos taurus (domestic cattle) ]

    Gene ID: 513850, updated on 1-Jan-2025

    Summary

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    Official Symbol
    CA13provided by VGNC
    Official Full Name
    carbonic anhydrase 13provided by VGNC
    Primary source
    VGNC:VGNC:26651
    See related
    BGD:BT28382; Ensembl:ENSBTAG00000001000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CA13 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (77332406..77371764, complement)

    Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene carbonic anhydrase 1 Neighboring gene carbonic anhydrase 1-like Neighboring gene uncharacterized LOC112449551 Neighboring gene ribosomal biogenesis factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC179400

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbonate dehydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    carbonic anhydrase 13
    XP_002692875.1
    XP_059730492.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      77332406..77371764 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002692829.7 → XP_002692875.1  carbonic anhydrase 13 isoform X1

      See identical proteins and their annotated locations for XP_002692875.1

      UniProtKB/TrEMBL
      F1MIP9, G3MX64
      Related
      ENSBTAP00000054124.2, ENSBTAT00000063585.3
      Conserved Domains (1) summary
      cd03119
      Location:5 → 261
      alpha_CA_I_II_III_XIII; Carbonic anhydrase alpha, isozymes I, II, and III and XIII. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on ...

    2. XM_059874509.1 → XP_059730492.1  carbonic anhydrase 13 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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