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    UBE2A ubiquitin conjugating enzyme E2 A [ Bos taurus (domestic cattle) ]

    Gene ID: 282107, updated on 29-Jan-2025

    Summary

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    Official Symbol
    UBE2Aprovided by VGNC
    Official Full Name
    ubiquitin conjugating enzyme E2 Aprovided by VGNC
    Primary source
    VGNC:VGNC:36576
    See related
    Ensembl:ENSBTAG00000045779
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    HR6A; BHR6A
    Orthologs
    human mouse all
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    Genomic context

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    See UBE2A in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (3930667..3947887)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 5 Neighboring gene STING1 ER exit protein 1 Neighboring gene NFKB repressing factor Neighboring gene septin 6 Neighboring gene small nucleolar RNA SNORA40 Neighboring gene sosondowah ankyrin repeat domain family member D

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC127256

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin conjugating enzyme activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of HULC complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-conjugating enzyme E2 A
    Names
    ubiquitin-conjugating enzyme E2A (RAD6 homolog)
    NP_001098795.1
    XP_010819625.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001105325.2 → NP_001098795.1  ubiquitin-conjugating enzyme E2 A

      See identical proteins and their annotated locations for NP_001098795.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102100
      UniProtKB/TrEMBL
      Q3T159, Q9N1X5
      Related
      ENSBTAP00070034492.1, ENSBTAT00070057995.1
      Conserved Domains (1) summary
      pfam00179
      Location:8 → 110
      UQ_con; Ubiquitin-conjugating enzyme

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      3930667..3947887
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010821323.4 → XP_010819625.1  ubiquitin-conjugating enzyme E2 A isoform X1

      See identical proteins and their annotated locations for XP_010819625.1

      UniProtKB/TrEMBL
      Q9N1X5
      Related
      ENSBTAP00070034473.1, ENSBTAT00070057956.1
      Conserved Domains (1) summary
      pfam00179
      Location:8 → 145
      UQ_con; Ubiquitin-conjugating enzyme
    Nucleotide Protein Strain
    Heading Accession and Version

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