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    PRORP protein only RNase P catalytic subunit [ Bos taurus (domestic cattle) ]

    Gene ID: 532995, updated on 31-Dec-2024

    Summary

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    Official Symbol
    PRORPprovided by VGNC
    Official Full Name
    protein only RNase P catalytic subunitprovided by VGNC
    Primary source
    VGNC:VGNC:55893
    See related
    BGD:BT20597; Ensembl:ENSBTAG00000009682
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    KIAA0391
    Orthologs
    human mouse all
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    Genomic context

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    See PRORP in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 21 NC_037348.1 (45395472..45533989)

    Chromosome 21 - NC_037348.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 177 member A1 Neighboring gene protein phosphatase 2 regulatory subunit B''gamma Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC132343372 Neighboring gene proteasome 20S subunit alpha 6 Neighboring gene uncharacterized LOC132342138

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037348.1 Chromosome 21 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC155252

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribonuclease P activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial tRNA 5'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA 5'-leader removal IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mitochondrial ribonuclease P complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial ribonuclease P catalytic subunit
    NP_001422054.1
    XP_024837623.1
    XP_024837624.1
    XP_024837625.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001435125.1 → NP_001422054.1  mitochondrial ribonuclease P catalytic subunit

      Status: VALIDATED

      Source sequence(s)
      NKLS02000021

    RNA

    1. NR_198897.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      NKLS02000021

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037348.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      45395472..45533989
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024981855.2 → XP_024837623.1  mitochondrial ribonuclease P catalytic subunit isoform X1

      UniProtKB/TrEMBL
      A0AAA9SPN3
      Conserved Domains (2) summary
      sd00004
      Location:211 → 239
      PPR; PPR repeat [structural motif]
      pfam16953
      Location:343 → 597
      PRORP; Protein-only RNase P

    2. XM_024981857.2 → XP_024837625.1  mitochondrial ribonuclease P catalytic subunit isoform X3

      UniProtKB/TrEMBL
      A0AAA9SPN3
      Conserved Domains (1) summary
      cl20439
      Location:343 → 543
      RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain

    3. XM_024981856.2 → XP_024837624.1  mitochondrial ribonuclease P catalytic subunit isoform X1

      UniProtKB/TrEMBL
      A0AAA9SPN3
      Conserved Domains (2) summary
      sd00004
      Location:211 → 239
      PPR; PPR repeat [structural motif]
      pfam16953
      Location:343 → 597
      PRORP; Protein-only RNase P
    Nucleotide Protein Strain
    Heading Accession and Version

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