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    ACTL6A actin like 6A [ Bos taurus (domestic cattle) ]

    Gene ID: 100125416, updated on 1-Jan-2025

    Summary

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    Official Symbol
    ACTL6Aprovided by VGNC
    Official Full Name
    actin like 6Aprovided by VGNC
    Primary source
    VGNC:VGNC:25575
    See related
    BGD:BT18065; Ensembl:ENSBTAG00000002460
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ACTL6A in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (87536377..87567798, complement)

    Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 5 like Neighboring gene ubiquitin specific peptidase 13 Neighboring gene NADH:ubiquinone oxidoreductase subunit B5 Neighboring gene mitochondrial ribosomal protein L47 Neighboring gene large ribosomal subunit protein uL5-like Neighboring gene G protein subunit beta 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC151809

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of NuA4 histone acetyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of SWI/SNF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    actin-like protein 6A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001105035.1 → NP_001098505.1  actin-like protein 6A

      See identical proteins and their annotated locations for NP_001098505.1

      Status: PROVISIONAL

      Source sequence(s)
      BC134613
      UniProtKB/TrEMBL
      A0AAA9S251, A4IFJ8
      Related
      ENSBTAP00000037066.3, ENSBTAT00000037228.4
      Conserved Domains (1) summary
      pfam00022
      Location:11 → 429
      Actin

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      87536377..87567798 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005201639.5 → XP_005201696.1  actin-like protein 6A isoform X1

      See identical proteins and their annotated locations for XP_005201696.1

      UniProtKB/TrEMBL
      A0AAA9S251
      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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