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    SASS6 SAS-6 centriolar assembly protein [ Bos taurus (domestic cattle) ]

    Gene ID: 504467, updated on 27-Dec-2024

    Summary

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    Official Symbol
    SASS6provided by VGNC
    Official Full Name
    SAS-6 centriolar assembly proteinprovided by VGNC
    Primary source
    VGNC:VGNC:34295
    See related
    BGD:BT29216; Ensembl:ENSBTAG00000015778
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See SASS6 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (43140706..43181953)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene AT-rich interactive domain-containing protein 3A-like Neighboring gene leucine rich repeat containing 39 Neighboring gene tRNA methyltransferase 13 homolog Neighboring gene major facilitator superfamily domain containing 14A Neighboring gene solute carrier family 35 member A3 Neighboring gene U5 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in centriole replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centriole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spindle assembly abnormal protein 6 homolog
    Names
    spindle assembly 6 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192026.1 → NP_001178955.1  spindle assembly abnormal protein 6 homolog

      See identical proteins and their annotated locations for NP_001178955.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000003
      UniProtKB/TrEMBL
      E1BAS3
      Related
      ENSBTAP00000064589.2, ENSBTAT00000075408.2
      Conserved Domains (3) summary
      cd00187
      Location:360 → 480
      TOP4c; DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC), bacterial DNA gyrases (A subunit, GyrA),mammalian DNA toposiomerases II. DNA topoisomerases are essential enzymes that regulate the conformational changes in DNA ...
      pfam15619
      Location:237 → 397
      Lebercilin; Ciliary protein causing Leber congenital amaurosis disease
      pfam16531
      Location:46 → 140
      SAS-6_N; Centriolar protein SAS N-terminal

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      43140706..43181953
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024985632.2 → XP_024841400.2  spindle assembly abnormal protein 6 homolog isoform X2

    2. XM_010803156.4 → XP_010801458.2  spindle assembly abnormal protein 6 homolog isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LVE2
      Related
      ENSBTAP00000020951.6, ENSBTAT00000020951.7
    Nucleotide Protein Strain
    Heading Accession and Version

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