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    RAD51B RAD51 paralog B [ Bos taurus (domestic cattle) ]

    Gene ID: 617007, updated on 29-Jan-2025

    Summary

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    Official Symbol
    RAD51Bprovided by VGNC
    Official Full Name
    RAD51 paralog Bprovided by VGNC
    Primary source
    VGNC:VGNC:33685
    See related
    BGD:BT28570; Ensembl:ENSBTAG00000018971
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    RAD51L1
    Orthologs
    human mouse all
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    Genomic context

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    See RAD51B in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (79667591..80404211)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene retinol dehydrogenase 11 Neighboring gene zinc finger FYVE-type containing 26 Neighboring gene retinol dehydrogenase 12 Neighboring gene uncharacterized LOC132346404 Neighboring gene GTP-binding nuclear protein Ran-like Neighboring gene ZFP36 ring finger protein like 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent DNA damage sensor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables double-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables four-way junction DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables single-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Rad51B-Rad51C-Rad51D-XRCC2 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in replication fork IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA repair protein RAD51 homolog 2
    Names
    RAD51 homolog B
    RAD51-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193137.1 → NP_001180066.1  DNA repair protein RAD51 homolog 2

      See identical proteins and their annotated locations for NP_001180066.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000010
      UniProtKB/TrEMBL
      A0AAA9TGR0, A0AAA9THU4
      Related
      ENSBTAP00070044566.1, ENSBTAT00070073163.1
      Conserved Domains (1) summary
      cd01123
      Location:97 → 357
      Rad51_DMC1_radA; Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a ...

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      79667591..80404211
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024997838.2 → XP_024853606.1  DNA repair protein RAD51 homolog 2 isoform X3

      UniProtKB/TrEMBL
      A0AAA9TNP8
      Related
      ENSBTAP00070044521.1, ENSBTAT00070073104.1
      Conserved Domains (1) summary
      cd01123
      Location:83 → 343
      Rad51_DMC1_radA; B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar ...

    2. XM_024997837.2 → XP_024853605.1  DNA repair protein RAD51 homolog 2 isoform X3

      UniProtKB/TrEMBL
      A0AAA9TNP8
      Conserved Domains (1) summary
      cd01123
      Location:83 → 343
      Rad51_DMC1_radA; B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar ...

    3. XM_024997839.2 → XP_024853607.1  DNA repair protein RAD51 homolog 2 isoform X3

      UniProtKB/TrEMBL
      A0AAA9TNP8
      Related
      ENSBTAP00070044624.1, ENSBTAT00070073250.1
      Conserved Domains (1) summary
      cd01123
      Location:83 → 343
      Rad51_DMC1_radA; B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar ...

    4. XM_024997835.2 → XP_024853603.1  DNA repair protein RAD51 homolog 2 isoform X1

      UniProtKB/TrEMBL
      A0AAA9TNP8
      Conserved Domains (1) summary
      cd01123
      Location:97 → 357
      Rad51_DMC1_radA; B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar ...

    5. XM_024997840.2 → XP_024853608.1  DNA repair protein RAD51 homolog 2 isoform X4

      UniProtKB/TrEMBL
      A0AAA9TNP8
      Conserved Domains (1) summary
      cd01123
      Location:81 → 318
      Rad51_DMC1_radA; B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar ...

    6. XM_024997841.2 → XP_024853609.1  DNA repair protein RAD51 homolog 2 isoform X5

      UniProtKB/TrEMBL
      A0AAA9THU4
      Conserved Domains (1) summary
      cd01123
      Location:81 → 318
      Rad51_DMC1_radA; B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar ...

    7. XM_059890659.1 → XP_059746642.1  DNA repair protein RAD51 homolog 2 isoform X2

      UniProtKB/TrEMBL
      A0AAA9THU4
    Nucleotide Protein Strain
    Heading Accession and Version

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