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    TTLL3 tubulin tyrosine ligase like 3 [ Bos taurus (domestic cattle) ]

    Gene ID: 531866, updated on 30-Jan-2025

    Summary

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    Gene symbol
    TTLL3
    Gene description
    tubulin tyrosine ligase like 3
    See related
    BGD:BT19447; EnsemblRapid:ENSBTAG00070021947
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TTLL3 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (16888782..16912625, complement)

    Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene jagunal homolog 1 Neighboring gene cell death inducing DFFA like effector c Neighboring gene RNA pseudouridine synthase D3 Neighboring gene transcriptional adaptor 3 Neighboring gene actin related protein 2/3 complex subunit 4 Neighboring gene uncharacterized LOC132343487

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC142578

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-glycine ligase activity, initiating IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cilium movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyglycylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tubulin monoglycylase TTLL3
    Names
    tubulin tyrosine ligase-like family, member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      16888782..16912625 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059880030.1 → XP_059736013.1  tubulin monoglycylase TTLL3 isoform X5

      Related
      ENSBTAP00070029368.1, ENSBTAT00070049438.1

    2. XM_059880029.1 → XP_059736012.1  tubulin monoglycylase TTLL3 isoform X5

    3. XM_059880026.1 → XP_059736009.1  tubulin monoglycylase TTLL3 isoform X2

    4. XM_059880027.1 → XP_059736010.1  tubulin monoglycylase TTLL3 isoform X3

    5. XM_059880028.1 → XP_059736011.1  tubulin monoglycylase TTLL3 isoform X4

    6. XM_059880032.1 → XP_059736015.1  tubulin monoglycylase TTLL3 isoform X7

    7. XM_059880031.1 → XP_059736014.1  tubulin monoglycylase TTLL3 isoform X6

    8. XM_059880025.1 → XP_059736008.1  tubulin monoglycylase TTLL3 isoform X1

    9. XM_059880034.1 → XP_059736017.1  tubulin monoglycylase TTLL3 isoform X9

      Related
      ENSBTAP00070029359.1, ENSBTAT00070049423.1

    10. XM_059880033.1 → XP_059736016.1  tubulin monoglycylase TTLL3 isoform X8

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001035387.1: Suppressed sequence

      Description
      NM_001035387.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: TTLL3 (GeneID:26140).
    Nucleotide Protein Strain
    Heading Accession and Version

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