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    MICALL2 MICAL like 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 510644, updated on 27-Dec-2024

    Summary

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    Official Symbol
    MICALL2provided by VGNC
    Official Full Name
    MICAL like 2provided by VGNC
    Primary source
    VGNC:VGNC:31460
    See related
    BGD:BT24048; Ensembl:ENSBTAG00000003049
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See MICALL2 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (41461259..41480270)

    Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene MAF bZIP transcription factor K Neighboring gene integrator complex subunit 1 Neighboring gene uncharacterized LOC132343890 Neighboring gene uncharacterized LOC107131853

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Copy number variations of MICAL-L2 shaping gene expression contribute to different phenotypes of cattle. Xu Y, et al. Mamm Genome, 2013 Dec. PMID 24196410
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The MICAL-L2 gene copy number were significantly associated with body weight, body height, and body length.
      Title: Copy number variations of MICAL-L2 shaping gene expression contribute to different phenotypes of cattle.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC160023

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MICAL-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001098932.1 → NP_001092402.1  MICAL-like protein 2

      Status: PROVISIONAL

      Source sequence(s)
      BC146098
      UniProtKB/TrEMBL
      A0A3Q1LY46, A6H735
      Related
      ENSBTAP00000062447.1, ENSBTAT00000074453.2
      Conserved Domains (3) summary
      cd09444
      Location:186 → 240
      LIM_Mical_like_1; This domain belongs to the LIM domain family which are found on Mical (molecule interacting with CasL) like proteins
      pfam00307
      Location:5 → 102
      CH; Calponin homology (CH) domain
      pfam12130
      Location:712 → 845
      DUF3585; Protein of unknown function (DUF3585)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      41461259..41480270
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059881237.1 → XP_059737220.1  MICAL-like protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LY46, F6REL8
      Related
      ENSBTAP00000003969.6, ENSBTAT00000003969.7

    2. XM_059881238.1 → XP_059737221.1  MICAL-like protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LY46

    3. XM_059881239.1 → XP_059737222.1  MICAL-like protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LY46
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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