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    ANKRD49 ankyrin repeat domain 49 [ Bos taurus (domestic cattle) ]

    Gene ID: 540949, updated on 1-Jan-2025

    Summary

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    Official Symbol
    ANKRD49provided by VGNC
    Official Full Name
    ankyrin repeat domain 49provided by VGNC
    Primary source
    VGNC:VGNC:25933
    See related
    BGD:BT14748; Ensembl:ENSBTAG00000009176
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    FGIF
    Orthologs
    human mouse all
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    Genomic context

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    See ANKRD49 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (1508943..1535088)

    Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene nucleoside diphosphate kinase 6-like Neighboring gene MRE11 homolog, double strand break repair nuclease Neighboring gene aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase Neighboring gene kelch repeat and BTB domain containing 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC129028

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat domain-containing protein 49
    Names
    fetal globin inducing factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014965.2 → NP_001014965.1  ankyrin repeat domain-containing protein 49

      See identical proteins and their annotated locations for NP_001014965.1

      Status: PROVISIONAL

      Source sequence(s)
      BC104574
      UniProtKB/Swiss-Prot
      Q5EA33
      UniProtKB/TrEMBL
      A0AAA9TC79
      Conserved Domains (2) summary
      cd00204
      Location:77 → 194
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:77 → 104
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      1508943..1535088
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059874948.1 → XP_059730931.1  ankyrin repeat domain-containing protein 49 isoform X1

      UniProtKB/Swiss-Prot
      Q5EA33
      UniProtKB/TrEMBL
      A0AAA9TC79

    2. XM_005215733.5 → XP_005215790.1  ankyrin repeat domain-containing protein 49 isoform X1

      See identical proteins and their annotated locations for XP_005215790.1

      UniProtKB/Swiss-Prot
      Q5EA33
      UniProtKB/TrEMBL
      A0AAA9TC79
      Related
      ENSBTAP00000045318.1, ENSBTAT00000048242.3
      Conserved Domains (2) summary
      cd00204
      Location:77 → 194
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:77 → 104
      ANK; ANK repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5EA33.1 GenPept UniProtKB/Swiss-Prot:Q5EA33

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