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    POMP proteasome maturation protein [ Bos taurus (domestic cattle) ]

    Gene ID: 510314, updated on 30-Jan-2025

    Summary

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    Official Symbol
    POMPprovided by VGNC
    Official Full Name
    proteasome maturation proteinprovided by VGNC
    Primary source
    VGNC:VGNC:33157
    See related
    BGD:BT26343; EnsemblRapid:ENSBTAG00070007923
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See POMP in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (31471714..31482887, complement)

    Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene microtubule associated scaffold protein 2 Neighboring gene uncharacterized LOC132346761 Neighboring gene solute carrier family 46 member 3 Neighboring gene uncharacterized LOC101904156 Neighboring gene uncharacterized LOC104973568

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC127942

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in proteasome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proteasome maturation protein
    Names
    proteassemblin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034376.2 → NP_001029548.1  proteasome maturation protein

      Status: PROVISIONAL

      Source sequence(s)
      BC102689
      UniProtKB/Swiss-Prot
      Q3SZV5
      Related
      ENSBTAP00070010416.1, ENSBTAT00070017863.1
      Conserved Domains (1) summary
      pfam05348
      Location:25 → 138
      UMP1; Proteasome maturation factor UMP1

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      31471714..31482887 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059892018.1 → XP_059748001.1  proteasome maturation protein isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3SZV5.1 GenPept UniProtKB/Swiss-Prot:Q3SZV5

    Gene LinkOut

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