U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MRPS17 mitochondrial ribosomal protein S17 [ Bos taurus (domestic cattle) ]

    Gene ID: 508143, updated on 29-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    MRPS17provided by VGNC
    Official Full Name
    mitochondrial ribosomal protein S17provided by VGNC
    Primary source
    VGNC:VGNC:110052
    See related
    BGD:BT24983; Ensembl:ENSBTAG00000007934
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MRPS17 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (27653220..27657437)

    Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene septin 14 Neighboring gene zinc finger protein 713 Neighboring gene nipsnap homolog 2 Neighboring gene transfer RNA glutamic acid (anticodon CUC)

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome. Kaushal PS, et al. Proc Natl Acad Sci U S A, 2014 May 20. PMID 24799711, Free PMC Article
    2. The small subunit of the mammalian mitochondrial ribosome. Identification of the full complement of ribosomal proteins present. Cavdar Koc E, et al. J Biol Chem, 2001 Jun 1. PMID 11279123
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Homology

    Clone Names

    • MGC137051

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mitochondrial small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    small ribosomal subunit protein uS17m
    Names
    28S ribosomal protein S17, mitochondrial
    MRP-S17
    S17mt

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001024500.2 → NP_001019671.1  small ribosomal subunit protein uS17m

      See identical proteins and their annotated locations for NP_001019671.1

      Status: PROVISIONAL

      Source sequence(s)
      AY911326
      UniProtKB/TrEMBL
      E1BF33
      Related
      ENSBTAP00070025431.1, ENSBTAT00070042591.1
      Conserved Domains (1) summary
      pfam00366
      Location:15 → 83
      Ribosomal_S17; Ribosomal protein S17

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      27653220..27657437
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005224873.4 → XP_005224930.1  small ribosomal subunit protein uS17m isoform X1

      See identical proteins and their annotated locations for XP_005224930.1

      UniProtKB/Swiss-Prot
      P82916, Q2NKU7, Q56K01
      UniProtKB/TrEMBL
      E1BF33
      Conserved Domains (1) summary
      pfam00366
      Location:15 → 83
      Ribosomal_S17; Ribosomal protein S17
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P82916.3 GenPept UniProtKB/Swiss-Prot:P82916

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.