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    CG34408 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31953, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG34408provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0085437
    Locus tag
    Dmel_CG34408
    See related
    AllianceGenome:FB:FBgn0085437
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GH09358; CG2967; CG32689; Dmel\CG34408; FBpp0111587
    Old locus tag
    CG2967; CG32689; Dmel_CG2967; Dmel_CG32689
    Summary
    Predicted to enable GTPase activator activity. Predicted to be involved in Ral protein signal transduction. Orthologous to human RALGAPB (Ral GTPase activating protein non-catalytic subunit beta). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG34408 in Genome Data Viewer
    Location:
    9B4-9B4; 1-31 cM
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (10220110..10230088)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (10114143..10124121)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene ATP synthase, delta subunit Neighboring gene antisense RNA:CR45629 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Hyperkinetic Neighboring gene antisense RNA:CR43959

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of the Ras-like small GTPases and their regulators. van Dam TJ, et al. Small GTPases, 2011 Jan. PMID 21686276, Free PMC Article
    2. Faint gray bands in Drosophila melanogaster polytene chromosomes are formed by coding sequences of housekeeping genes. Demakova OV, et al. Chromosoma, 2020 Mar. PMID 31820086
    3. Genome-wide identification of alternatively spliced mRNA targets of specific RNA-binding proteins. Robida MD, et al. PLoS One, 2007 Jun 13. PMID 17565373, Free PMC Article
    4. The Genetic Architecture of Ovariole Number in Drosophila melanogaster: Genes with Major, Quantitative, and Pleiotropic Effects. Lobell AS, et al. G3 (Bethesda), 2017 Jul 5. PMID 28550012, Free PMC Article
    5. Comprehensive Identification and Alternative Splicing of Microexons in Drosophila. Pang TL, et al. Front Genet, 2021. PMID 33859668, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables GTPase activator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in Ral protein signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of small GTPase mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG34408-PA
    CG34408-PB
    CG34408-PC
    CG34408-PD
    CG34408-PE
    CG34408-PF
    CG34408-PG
    CG34408-PH
    CG34408-PI
    CG34408-PJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      10220110..10230088
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298146.1 → NP_001285075.1  uncharacterized protein Dmel_CG34408, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285075.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U4G6, X2JB32

    2. NM_001298149.1 → NP_001285078.1  uncharacterized protein Dmel_CG34408, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285078.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U4G6, X2JEC6

    3. NM_001298147.1 → NP_001285076.1  uncharacterized protein Dmel_CG34408, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285076.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U4G6, X2JD61

    4. NM_001103468.2 → NP_001096938.1  uncharacterized protein Dmel_CG34408, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001096938.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IRL5, Q9U4G6

    5. NM_001298148.1 → NP_001285077.1  uncharacterized protein Dmel_CG34408, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285077.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U4G6, X2JJ95

    6. NM_132385.3 → NP_572613.2  uncharacterized protein Dmel_CG34408, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572613.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U4G6, Q9W2X2
      Related
      FBpp0071374

    7. NM_001144712.2 → NP_001138184.1  uncharacterized protein Dmel_CG34408, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001138184.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z138, Q9U4G6

    8. NM_001298150.1 → NP_001285079.1  uncharacterized protein Dmel_CG34408, isoform I [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285079.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U4G6, X2JEP7

    9. NM_001144711.2 → NP_001138183.1  uncharacterized protein Dmel_CG34408, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001138183.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z140

    10. NM_001298151.1 → NP_001285080.1  uncharacterized protein Dmel_CG34408, isoform J [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285080.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X2JB38
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B7Z138 B7Z138
    B7Z140 B7Z140
    Q8IRL5 Q8IRL5
    Q9U4G6 Q9U4G6
    Q9W2X2 Q9W2X2
    X2JB32 X2JB32
    X2JB38 X2JB38
    X2JD61 X2JD61
    X2JEC6 X2JEC6
    X2JEP7 X2JEP7
    X2JJ95 X2JJ95

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