U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    sprt sprite [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 246397, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    sprtprovided by FlyBase
    Official Full Name
    spriteprovided by FlyBase
    Primary source
    FLYBASE:FBgn0082585
    Locus tag
    Dmel_CG30023
    See related
    AllianceGenome:FB:FBgn0082585
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG30023; CG9026; Dmel\CG30023
    Summary
    Is expressed in several structures, including adult tracheal system; anterior endoderm anlage; gut section; mesoderm; and visceral mesoderm derivative. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See sprt in Genome Data Viewer
    Location:
    47F8-47F8; 2-64 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (11384743..11397432, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (7272248..7284937, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Tetraspanin 47F Neighboring gene Superoxide dismutase 3 Neighboring gene uncharacterized protein Neighboring gene transfer RNA:Threonine-TGT 2-1 Neighboring gene transfer RNA:Threonine-TGT 2-2 Neighboring gene transfer RNA:Threonine-TGT 2-3

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Generation and characterization of new alleles of quiver (qvr) that encodes an extracellular modulator of the Shaker potassium channel. Ruan H, et al. J Neurogenet, 2017 Dec. PMID 29117754, Free PMC Article
    2. Transcriptional and epigenetic signatures of zygotic genome activation during early Drosophila embryogenesis. Darbo E, et al. BMC Genomics, 2013 Apr 5. PMID 23560912, Free PMC Article
    3. Enhancer-promoter communication at the Drosophila engrailed locus. Kwon D, et al. Development, 2009 Sep. PMID 19675130, Free PMC Article
    4. Systematic determination of patterns of gene expression during Drosophila embryogenesis. Tomancak P, et al. Genome Biol, 2002. PMID 12537577, Free PMC Article
    5. Population-scale long-read sequencing uncovers transposable elements associated with gene expression variation and adaptive signatures in Drosophila. Rech GE, et al. Nat Commun, 2022 Apr 12. PMID 35413957, Free PMC Article

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    sprite
    Names
    CG30023-PA
    sprt-PA

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      11384743..11397432 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136839.3 → NP_610683.1  sprite [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610683.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q961J0
      Related
      FBpp0087243
      Conserved Domains (1) summary
      cl00117
      Location:247 → 288
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q961J0 Q961J0

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools