U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG13601 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42826, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG13601provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039126
    Locus tag
    Dmel_CG13601
    See related
    AllianceGenome:FB:FBgn0039126
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13601
    Summary
    Predicted to be involved in regulation of lipid metabolic process. Predicted to be active in mitochondrion. Is expressed in adult head and organism. Human ortholog(s) of this gene implicated in 3-methylglutaconic aciduria type 3 and optic atrophy 3. Orthologous to human OPA3 (outer mitochondrial membrane lipid metabolism regulator OPA3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG13601 in Genome Data Viewer
    Location:
    95C13-95C13; 3-81 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23926372..23927634, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19752094..19753356, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene six-banded Neighboring gene uncharacterized protein Neighboring gene Nuclear division cycle 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Regulatory particle triple-A ATPase 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Gene knockout by inducing P-element transposition in Drosophila. Ou HL. Genet Mol Res, 2013 Jan 4. PMID 23315879
    2. Extensive identification and analysis of conserved small ORFs in animals. Mackowiak SD, et al. Genome Biol, 2015 Sep 14. PMID 26364619, Free PMC Article
    3. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article
    4. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
    5. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of lipid metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG13601-PA
    CG13601-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      23926372..23927634 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142935.2 → NP_651192.1  uncharacterized protein Dmel_CG13601, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651192.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VCG3
      Related
      FBpp0083908
      Conserved Domains (1) summary
      pfam07047
      Location:9 → 123
      OPA3; Optic atrophy 3 protein (OPA3)

    2. NM_001275961.1 → NP_001262890.1  uncharacterized protein Dmel_CG13601, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262890.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KGV7
      Conserved Domains (1) summary
      pfam07047
      Location:9 → 123
      OPA3; Optic atrophy 3 protein (OPA3)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KGV7 A0A0B4KGV7
    Q9VCG3.1 Q9VCG3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools