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    Pli Pellino [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42821, updated on 9-Dec-2024

    Summary

    Official Symbol
    Pliprovided by FlyBase
    Official Full Name
    Pellinoprovided by FlyBase
    Primary source
    FLYBASE:FBgn0025574
    Locus tag
    Dmel_CG5212
    See related
    AllianceGenome:FB:FBgn0025574
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5212; Dmel\CG5212; PAP; pellino; PELLINO; pli
    Summary
    Enables kinase regulator activity and ubiquitin-protein transferase activity. Involved in several processes, including protein K48-linked ubiquitination; regulation of Toll signaling pathway; and regulation of defense response. Located in cytoplasmic side of plasma membrane and cytosol. Is expressed in adult fat body and organism. Human ortholog(s) of this gene implicated in colorectal cancer. Orthologous to several human genes including PELI2 (pellino E3 ubiquitin protein ligase family member 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Pli in Genome Data Viewer
    Location:
    95C5-95C8; 3-81 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23860162..23890052, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19685884..19715774, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene small nuclear RNA U1 at 95C b Neighboring gene small nuclear RNA U1 at 95C a Neighboring gene Transcription-factor-IIA-S Neighboring gene pseudo Neighboring gene testis-specifically expressed bromodomain containing protein-1

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables kinase regulator activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables ubiquitin protein ligase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ubiquitin-protein transferase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic side of plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    pellino
    Names
    CG5212-PA
    CG5212-PB
    Pli-PA
    Pli-PB
    pelle associated protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      23860162..23890052 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001104420.3NP_001097890.1  pellino, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097890.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O77237
      UniProtKB/TrEMBL
      A8JR89
      Conserved Domains (1) summary
      pfam04710
      Location:21424
      Pellino
    2. NM_079742.4NP_524466.1  pellino, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524466.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O77237
      UniProtKB/TrEMBL
      A8JR89
      Related
      FBpp0083913
      Conserved Domains (1) summary
      pfam04710
      Location:21424
      Pellino