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    LOC1270396 tubulin beta chain [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1270396, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC1270396
    Gene description
    tubulin beta chain
    See related
    VectorBase:AGAMI1_006022
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP005293
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    Genomic context

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    See LOC1270396 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (82681556..82686378)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene La related protein Neighboring gene nucleolysin TIAR Neighboring gene GTP-binding protein 2 Neighboring gene uncharacterized LOC3289936 Neighboring gene evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tubulin beta chain
    Names
    AGAP005293-PA
    AGAP005293-PB

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      82681556..82686378
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001688111.2 → XP_001688163.1  tubulin beta chain isoform X1

      See identical proteins and their annotated locations for XP_001688163.1

      UniProtKB/TrEMBL
      A7US13, Q7PFA8
      Conserved Domains (1) summary
      PLN00220
      Location:1 → 434
      PLN00220; tubulin beta chain; Provisional

    2. XM_061646387.1 → XP_061502371.1  tubulin beta chain isoform X2

      UniProtKB/TrEMBL
      A0A903X5H0, Q7PFA8
    Nucleotide Protein Strain
    Heading Accession and Version

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