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    LOC5666853 WD repeat, SAM and U-box domain-containing protein 1 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 5666853, updated on 22-Jun-2024

    Summary

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    Gene symbol
    LOC5666853
    Gene description
    WD repeat, SAM and U-box domain-containing protein 1
    See related
    VectorBase:AGAMI1_008811
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP005577
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    Genomic context

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    See LOC5666853 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (86236699..86246556)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene gamma-tubulin complex component 2 homolog Neighboring gene aspartate--tRNA ligase, cytoplasmic Neighboring gene anaphase promoting complex subunit 5 ida Neighboring gene coiled-coil-helix-coiled-coil-helix domain-containing protein 2 Neighboring gene probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat, SAM and U-box domain-containing protein 1
    Names
    AGAP005577-PA
    WD repeat, sterile alpha motif and U-box domain containing 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      86236699..86246556
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001688631.2 → XP_001688683.1  WD repeat, SAM and U-box domain-containing protein 1

      See identical proteins and their annotated locations for XP_001688683.1

      UniProtKB/TrEMBL
      A7UTR7
      Conserved Domains (4) summary
      smart00504
      Location:383 → 446
      Ubox; Modified RING finger domain
      COG2319
      Location:6 → 357
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:12 → 352
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:65 → 102
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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