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    Sf3b6 splicing factor 3B subunit 6 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1273189, updated on 22-Jun-2024

    Summary

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    Gene symbol
    Sf3b6
    Gene description
    splicing factor 3B subunit 6
    See related
    VectorBase:AGAMI1_013540
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP002780
    Orthologs
    fruit fly all
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    Genomic context

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    See Sf3b6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (26894763..26895477, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2-alpha kinase Neighboring gene mitochondrial ribosomal protein S33 Neighboring gene misato mitochondrial distribution and morphology regulator Neighboring gene transcription factor IIFalpha Neighboring gene C-type lectin domain containing ema Neighboring gene uncharacterized LOC11175743 Neighboring gene Nuclear autoantigenic sperm protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    splicing factor 3B subunit 6
    Names
    AGAP002780-PA
    pre-mRNA branch site protein p14

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      26894763..26895477 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_312143.5 → XP_312143.4  splicing factor 3B subunit 6

      See identical proteins and their annotated locations for XP_312143.4

      UniProtKB/TrEMBL
      Q7QCS0
      Conserved Domains (1) summary
      cd12241
      Location:17 → 93
      RRM_SF3B14; RNA recognition motif (RRM) found in pre-mRNA branch site protein p14 (SF3B14) and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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