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    LOC1280030 E3 ubiquitin-protein ligase Su(dx) [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1280030, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC1280030
    Gene description
    E3 ubiquitin-protein ligase Su(dx)
    See related
    VectorBase:AGAMI1_012596
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP009074
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    Genomic context

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    See LOC1280030 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 3 NC_064602.1 (25123195..25132428, complement)

    Chromosome 3 - NC_064602.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC5668151 Neighboring gene NADH dehydrogenase (ubiquinone) 13 kDa A subunit Neighboring gene ATP-dependent RNA helicase 25E Neighboring gene carnitine O-acetyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064602.1 Chromosome 3 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase Su(dx)
    Names
    AGAP009074-PA
    Atrophin-1 interacting protein 5 (WW domain containing E3 ubiquitin protein li

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064602.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      25123195..25132428 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061656324.1 → XP_061512308.1  E3 ubiquitin-protein ligase Su(dx) isoform X2

      UniProtKB/TrEMBL
      A0A1S4H0U3

    2. XM_061656321.1 → XP_061512305.1  E3 ubiquitin-protein ligase Su(dx) isoform X1

      UniProtKB/TrEMBL
      A0A1S4H0U3

    3. XM_061656325.1 → XP_061512309.1  E3 ubiquitin-protein ligase Su(dx) isoform X2

      UniProtKB/TrEMBL
      A0A1S4H0U3

    4. XM_061656322.1 → XP_061512306.1  E3 ubiquitin-protein ligase Su(dx) isoform X1

      UniProtKB/TrEMBL
      A0A1S4H0U3

    5. XM_061656323.1 → XP_061512307.1  E3 ubiquitin-protein ligase Su(dx) isoform X1

      UniProtKB/TrEMBL
      A0A1S4H0U3
    Nucleotide Protein Strain
    Heading Accession and Version

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