U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RpL21 ribosomal protein L21 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1280539, updated on 22-Jun-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    RpL21
    Gene description
    ribosomal protein L21
    See related
    VectorBase:AGAMI1_006322
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP012138
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RpL21 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 3 NC_064602.1 (95257367..95258667)

    Chromosome 3 - NC_064602.1Genomic Context describing neighboring genes Neighboring gene probable RNA-binding protein 18 Neighboring gene regulatory particle non-ATPase 8 Neighboring gene mitochondrial ribosomal protein S25 Neighboring gene Ubiquitin-specific protease 12/46 Neighboring gene eukaryotic translation initiation factor 3 subunit B Neighboring gene Ankyrin repeat-rich membrane spanning

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_064602.1 Chromosome 3 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    large ribosomal subunit protein eL21
    Names
    60S ribosomal protein L21
    AGAP012138-PA

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064602.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      95257367..95258667
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_320389.5 → XP_320389.2  large ribosomal subunit protein eL21 isoform X1

      See identical proteins and their annotated locations for XP_320389.2

      UniProtKB/TrEMBL
      Q7PZX9
      Conserved Domains (1) summary
      PTZ00189
      Location:1 → 162
      PTZ00189; 60S ribosomal protein L21; Provisional

    2. XM_061655768.1 → XP_061511752.1  large ribosomal subunit protein eL21 isoform X1

      UniProtKB/TrEMBL
      Q7PZX9

    3. XM_061655772.1 → XP_061511756.1  large ribosomal subunit protein eL21 isoform X2

    4. XM_061655769.1 → XP_061511753.1  large ribosomal subunit protein eL21 isoform X1

      UniProtKB/TrEMBL
      Q7PZX9

    5. XM_061655770.1 → XP_061511754.1  large ribosomal subunit protein eL21 isoform X1

      UniProtKB/TrEMBL
      Q7PZX9

    6. XM_061655771.1 → XP_061511755.1  large ribosomal subunit protein eL21 isoform X1

      UniProtKB/TrEMBL
      Q7PZX9
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials