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    LOC1272110 cadherin-86C [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1272110, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC1272110
    Gene description
    cadherin-86C
    See related
    VectorBase:AGAMI1_000184
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP000153
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC1272110 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) X NC_064600.1 (2377367..2490840)

    Chromosome X - NC_064600.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC1272116 Neighboring gene Ras association family member Neighboring gene uncharacterized LOC1272113 Neighboring gene uncharacterized LOC1272111 Neighboring gene probable 4-coumarate--CoA ligase 1 Neighboring gene spindle apparatus coiled-coil protein 1 spindly Neighboring gene alpha-ketoglutarate-dependent dioxygenase AlkB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064600.1 Chromosome X Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cadherin-86C
    Names
    AGAP000153-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064600.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      2377367..2490840
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061646912.1 → XP_061502896.1  cadherin-86C isoform X2

      UniProtKB/TrEMBL
      Q7QEU4

    2. XM_061646923.1 → XP_061502907.1  cadherin-86C isoform X2

      UniProtKB/TrEMBL
      Q7QEU4

    3. XM_061646915.1 → XP_061502899.1  cadherin-86C isoform X2

      UniProtKB/TrEMBL
      Q7QEU4

    4. XM_061646945.1 → XP_061502929.1  cadherin-86C isoform X2

      UniProtKB/TrEMBL
      Q7QEU4

    5. XM_061646936.1 → XP_061502920.1  cadherin-86C isoform X2

      UniProtKB/TrEMBL
      Q7QEU4

    6. XM_061646931.1 → XP_061502915.1  cadherin-86C isoform X2

      UniProtKB/TrEMBL
      Q7QEU4

    7. XM_061646954.1 → XP_061502938.1  cadherin-86C isoform X2

      UniProtKB/TrEMBL
      Q7QEU4

    8. XM_061646956.1 → XP_061502940.1  cadherin-86C isoform X3

      UniProtKB/TrEMBL
      Q7QEU4

    9. XM_310987.6 → XP_310987.6  cadherin-86C isoform X1

      UniProtKB/TrEMBL
      Q7QEU4

    10. XM_061646958.1 → XP_061502942.1  cadherin-86C isoform X4

      UniProtKB/TrEMBL
      Q7QEU4

    11. XM_061646963.1 → XP_061502947.1  cadherin-86C isoform X5

    Nucleotide Protein Strain
    Heading Accession and Version

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