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    LOC3289708 small ribosomal subunit protein uS8A [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 3289708, updated on 22-Jun-2024

    Summary

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    Gene symbol
    LOC3289708
    Gene description
    small ribosomal subunit protein uS8A
    See related
    VectorBase:AGAMI1_002854
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    RpS15a-1; AGAP000541
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    Genomic context

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    See LOC3289708 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) X NC_064600.1 (9746435..9749777)

    Chromosome X - NC_064600.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC1271699 Neighboring gene proton-coupled amino acid transporter-like protein CG1139 Neighboring gene mucin-19 Neighboring gene uncharacterized LOC133391580 Neighboring gene Vitamin-K epoxide reductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064600.1 Chromosome X Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    small ribosomal subunit protein uS8A
    Names
    40S ribosomal protein S15a
    AGAP000541-PA
    AGAP000541-PB

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064600.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      9746435..9749777
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_565801.4 → XP_565801.1  small ribosomal subunit protein uS8A

      See identical proteins and their annotated locations for XP_565801.1

      UniProtKB/TrEMBL
      F5HJF9, Q5TV73
      Conserved Domains (1) summary
      PTZ00158
      Location:1 → 130
      PTZ00158; 40S ribosomal protein S15A; Provisional

    2. XM_061651655.1 → XP_061507639.1  small ribosomal subunit protein uS8A

      UniProtKB/TrEMBL
      F5HJF9, Q5TV73
    Nucleotide Protein Strain
    Heading Accession and Version

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