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    PF3D7_1428600 peptide chain release factor 1 [ Plasmodium falciparum 3D7 ]

    Gene ID: 811847, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1428600
    Gene description
    peptide chain release factor 1
    Locus tag
    PF3D7_1428600
    See related
    PlasmoDB:PF3D7_1428600; VEuPathDB:PF3D7_1428600
    Gene type
    protein coding
    RNA name
    peptide chain release factor 1
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1428600 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    8
    Sequence:
    Chromosome: 14; NC_037283.1 (1127042..1129031)

    Chromosome 14 - NC_037283.1Genomic Context describing neighboring genes Neighboring gene WD and tetratricopeptide repeats protein 1, putative Neighboring gene protein kinase, putative Neighboring gene heme/steroid binding domain containing protein, putative Neighboring gene transcription initiation TFIID-like, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037283.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Polypeptide release factors and stop codon recognition in the apicoplast and mitochondrion of Plasmodium falciparum. Vaishya S, et al. Mol Microbiol, 2016 Jun. PMID 26946524
    2. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
    3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables ribosome binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apicoplast HDA PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptide chain release factor 1
    XP_001348439.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037283.1 Reference assembly

      Range
      1127042..1129031
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001348403.1 → XP_001348439.1  peptide chain release factor 1 [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001348439.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024WYP7, A0A0L1IFV4, A0A0L7K6P1, Q8ILH8, W4IAB7, W7FPJ2, W7JX14
      Conserved Domains (1) summary
      cl40670
      Location:60 → 302
      PCRF; PCRF domain
    Nucleotide Protein
    Heading Accession and Version

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