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    PF3D7_0501400 interspersed repeat antigen [ Plasmodium falciparum 3D7 ]

    Gene ID: 812870, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0501400
    Gene description
    interspersed repeat antigen
    Locus tag
    PF3D7_0501400
    See related
    PlasmoDB:PF3D7_0501400; VEuPathDB:PF3D7_0501400
    Gene type
    protein coding
    RNA name
    interspersed repeat antigen
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0501400 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_004326.2 (74509..79842)

    Chromosome 5 - NC_004326.2Genomic Context describing neighboring genes Neighboring gene parasite-infected erythrocyte surface protein Neighboring gene skeleton-binding protein 1 Neighboring gene rhoptry-associated protein 3 Neighboring gene rhoptry-associated protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004326.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A network-based approach reveals novel invasion and Maurer's clefts-related proteins in Plasmodium falciparum. Das D, et al. Mol Omics, 2019 Dec 2. PMID 31631203
    2. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    3. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in Maurer's cleft RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    interspersed repeat antigen

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004326.2 Reference assembly

      Range
      74509..79842
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351537.2 → XP_001351573.2  interspersed repeat antigen [Plasmodium falciparum 3D7]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S9VMT2, Q8I486
      Conserved Domains (2) summary
      cl26557
      Location:165 → 318
      RNase_E_G; Ribonuclease E/G family
      cl27169
      Location:264 → 404
      ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...
    Nucleotide Protein
    Heading Accession and Version

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