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    PF3D7_0522800 pre-mRNA-splicing factor BUD31, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 813043, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0522800
    Gene description
    pre-mRNA-splicing factor BUD31, putative
    Locus tag
    PF3D7_0522800
    See related
    PlasmoDB:PF3D7_0522800; VEuPathDB:PF3D7_0522800
    Gene type
    protein coding
    RNA name
    pre-mRNA-splicing factor BUD31, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0522800 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_004326.2 (944184..944931, complement)

    Chromosome 5 - NC_004326.2Genomic Context describing neighboring genes Neighboring gene inner membrane complex protein Neighboring gene iron-sulfur assembly protein Neighboring gene zinc finger protein, putative Neighboring gene multidrug resistance protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004326.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    2. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within RNA splicing ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within alternative mRNA splicing, via spliceosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of U2 snRNP ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    pre-mRNA-splicing factor BUD31, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004326.2 Reference assembly

      Range
      944184..944931 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351749.1 → XP_001351785.1  pre-mRNA-splicing factor BUD31, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351785.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VBW4, A0A024VSR4, A0A024WCZ1, A0A024WU48, A0A024XD82, A0A0L7KCZ8, A0A0L7M5H7, Q8I3N5, W4IML7, W4IVM0, W7FC37, W7G055, W7JGL1, W7K941
      Conserved Domains (1) summary
      pfam01125
      Location:1 → 144
      G10; G10 protein
    Nucleotide Protein
    Heading Accession and Version

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