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    Gm5148 predicted gene 5148 [ Mus musculus (house mouse) ]

    Gene ID: 381438, updated on 27-Nov-2024

    Summary

    Official Symbol
    Gm5148provided by MGI
    Official Full Name
    predicted gene 5148provided by MGI
    Primary source
    MGI:MGI:3646006
    See related
    Ensembl:ENSMUSG00000058174 AllianceGenome:MGI:3646006
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG381438
    Expression
    Broad expression in liver E14 (RPKM 404.1), CNS E11.5 (RPKM 287.4) and 25 other tissues See more
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    Genomic context

    See Gm5148 in Genome Data Viewer
    Location:
    3 B; 3 18.46 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (37768339..37778509, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (37714190..37724360, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 46799 Neighboring gene STARR-seq mESC enhancer starr_07440 Neighboring gene predicted gene, 42211 Neighboring gene STARR-seq mESC enhancer starr_07442 Neighboring gene ribosomal protein S23, pseudogene 1 Neighboring gene predicted gene, 36620 Neighboring gene ribosomal protein L31, pseudogene 15 Neighboring gene STARR-seq mESC enhancer starr_07446 Neighboring gene predicted gene, 42210 Neighboring gene predicted gene 42921

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC381438

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198657.2NP_941059.1  uncharacterized protein LOC381438

      See identical proteins and their annotated locations for NP_941059.1

      Status: PREDICTED

      Source sequence(s)
      AK039710
      Consensus CDS
      CCDS50896.1
      UniProtKB/TrEMBL
      Q8BGG2
      Related
      ENSMUSP00000078691.5, ENSMUST00000079755.5

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      37768339..37778509 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)