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    LOC101929460 uncharacterized LOC101929460 [ Homo sapiens (human) ]

    Gene ID: 101929460, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC101929460
    Gene description
    uncharacterized LOC101929460
    See related
    Ensembl:ENSG00000229720
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC101929460 in Genome Data Viewer
    Location:
    6q27
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (169034171..169035643, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (170385402..170386874, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (169434266..169435738, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378144 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:169267268-169267871 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:169267872-169268474 Neighboring gene uncharacterized LOC105378146 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:169350566-169351070 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:169362660-169363859 Neighboring gene uncharacterized LOC105378145 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:169379249-169379891 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:169400447-169400946 Neighboring gene NANOG hESC enhancer GRCh37_chr6:169406890-169407416 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:169418104-169418720 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:169418721-169419336 Neighboring gene uncharacterized LOC102724357 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr6:169469909-169471108 Neighboring gene uncharacterized LOC124901469

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_134622.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL109924
      Related
      ENST00000419800.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      169034171..169035643 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      170385402..170386874 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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    Research Materials