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    RPL31B ribosomal 60S subunit protein L31B [ Saccharomyces cerevisiae S288C ]

    Gene ID: 851122, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RPL31B
    Official Full Name
    ribosomal 60S subunit protein L31B
    Primary source
    SGD:S000004398
    Locus tag
    YLR406C
    See related
    AllianceGenome:SGD:S000004398; FungiDB:YLR406C; VEuPathDB:YLR406C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    A structural constituent of ribosome. Involved in cytoplasmic translation and regulation of translational fidelity. Part of cytosolic large ribosomal subunit. Orthologous to human RPL31 (ribosomal protein L31). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See RPL31B in Genome Data Viewer
    Location:
    chromosome: XII
    Exon count:
    2
    Sequence:
    Chromosome: XII; NC_001144.5 (931065..931755, complement)

    Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene seipin Neighboring gene tRNA dihydrouridine synthase Neighboring gene uncharacterized protein Neighboring gene Gag1p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001144.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ribosome-associated complex binds to ribosomes in close proximity of Rpl31 at the exit of the polypeptide tunnel in yeast. Peisker K, et al. Mol Biol Cell, 2008 Dec. PMID 18829863, Free PMC Article
    2. The dynamic architecture of Map1- and NatB-ribosome complexes coordinates the sequential modifications of nascent polypeptide chains. Knorr AG, et al. PLoS Biol, 2023 Apr. PMID 37079644, Free PMC Article
    3. Dual binding mode of the nascent polypeptide-associated complex reveals a novel universal adapter site on the ribosome. Pech M, et al. J Biol Chem, 2010 Jun 18. PMID 20410297, Free PMC Article
    4. A nuclear import pathway for a protein involved in tRNA maturation. Rosenblum JS, et al. J Cell Biol, 1997 Dec 29. PMID 9412461, Free PMC Article
    5. Cryo-EM structures of Arx1 and maturation factors Rei1 and Jjj1 bound to the 60S ribosomal subunit. Greber BJ, et al. Nat Struct Mol Biol, 2012 Dec. PMID 23142985

    See all (74) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in cytoplasmic translation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in regulation of translational fidelity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal 60S subunit protein L31B
    NP_013510.3
    • Ribosomal 60S subunit protein L31B; associates with karyopherin Sxm1p; loss of both Rpl31p and Rpl39p confers lethality; homologous to mammalian ribosomal protein L31, no bacterial homolog; RPL31B has a paralog, RPL31A, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001144.5 Reference assembly

      Range
      931065..931755 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182294.3 → NP_013510.3  TPA: ribosomal 60S subunit protein L31B [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013510.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VZ39, P0C2H9
      UniProtKB/TrEMBL
      A7A1S9, B3RHR8, C7GJN7, C7GXK8, C8ZE15, G2WJL9, N1P066
      Conserved Domains (1) summary
      pfam01198
      Location:6 → 87
      Ribosomal_L31e; Ribosomal protein L31e
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0C2H9.1

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