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    F56B3.11 Mitochondrial import inner membrane translocase subunit Tim21;TIM21-like protein, mitochondrial [ Caenorhabditis elegans ]

    Gene ID: 176907, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F56B3.11
    Official Full Name
    Mitochondrial import inner membrane translocase subunit Tim21;TIM21-like protein, mitochondrial
    Primary source
    WormBase:WBGene00018934
    Locus tag
    CELE_F56B3.11
    See related
    AllianceGenome:WB:WBGene00018934
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in protein import into mitochondrial matrix. Predicted to be located in mitochondrial inner membrane. Predicted to be part of TIM23 mitochondrial import inner membrane translocase complex. Orthologous to human TIMM21 (translocase of inner mitochondrial membrane 21). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F56B3.11 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (795755..796571, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene RNA polymerase II-associated protein 1 N-terminal domain-containing protein;RPAP1_N domain-containing protein Neighboring gene Receptor expression-enhancing protein Neighboring gene Skp1-related protein Neighboring gene Enoyl-CoA hydratase, mitochondrial Neighboring gene ncRNA Neighboring gene Large ribosomal subunit protein mL46

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in protein import into mitochondrial matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in protein import into mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of TIM23 mitochondrial import inner membrane translocase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of TIM23 mitochondrial import inner membrane translocase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Mitochondrial import inner membrane translocase subunit Tim21;TIM21-like protein, mitochondrial
    NP_499991.1
    • Confirmed by transcript evidence
    NP_499992.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      795755..796571 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067590.5 → NP_499991.1  Mitochondrial import inner membrane translocase subunit Tim21 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499991.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TXR7
      Conserved Domains (1) summary
      pfam08294
      Location:73 → 213
      TIM21; TIM21

    2. NM_067591.6 → NP_499992.1  TIM21-like protein, mitochondrial [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499992.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2L085
      Conserved Domains (1) summary
      cl21648
      Location:73 → 119
      Coa1; Cytochrome oxidase complex assembly protein 1
    Nucleotide Protein
    Heading Accession and Version

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