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    hpo-39 Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 190447, updated on 17-Oct-2024

    Summary

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    Official Symbol
    hpo-39
    Official Full Name
    Uncharacterized protein
    Primary source
    WormBase:WBGene00022020
    Locus tag
    CELE_Y61A9LA.9
    See related
    AllianceGenome:WB:WBGene00022020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See hpo-39 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_003283.11 (4573133..4573924, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene GED domain-containing protein Neighboring gene Zinc finger CCCH domain-containing protein 14 Neighboring gene ALO domain-containing protein;Autophagy-related protein 101;C2H2-type domain-containing protein;NR LBD domain-containing protein Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene ncRNA Neighboring gene transcellular chaperone signaling (x)cross tissue

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
    2. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
    3. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Uncharacterized protein
    NP_504242.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      4573133..4573924 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071841.1 → NP_504242.1  Uncharacterized protein CELE_Y61A9LA.9 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_504242.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N312
    Nucleotide Protein
    Heading Accession and Version

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