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    znf-593 Zinc finger protein 593 homolog [ Caenorhabditis elegans ]

    Gene ID: 176624, updated on 9-Dec-2024

    Summary

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    Official Symbol
    znf-593
    Official Full Name
    Zinc finger protein 593 homolog
    Primary source
    WormBase:WBGene00013236
    Locus tag
    CELE_Y56A3A.18
    See related
    AllianceGenome:WB:WBGene00013236
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable metal ion binding activity. Predicted to be involved in ribosome biogenesis. Predicted to be located in cytoplasm and nucleus. Is expressed in head and intestine. Orthologous to human ZNF593 (zinc finger protein 593). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See znf-593 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003281.10 (11917836..11918719, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Rubicon Homology domain-containing protein Neighboring gene Acyl carrier protein Neighboring gene Nuclear pore complex protein npp-16 Neighboring gene CCR4-NOT transcription complex subunit 7 Neighboring gene Translocon-associated protein subunit delta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Zinc finger protein 593 homolog
    NP_499552.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      11917836..11918719 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067151.7 → NP_499552.1  Zinc finger protein 593 homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499552.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9U239
      Conserved Domains (1) summary
      COG5112
      Location:6 → 99
      UFD2; U1-like Zn-finger-containing protein [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9U239.1

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