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    tsp-3 Tetraspanin [ Caenorhabditis elegans ]

    Gene ID: 192059, updated on 9-Dec-2024

    Summary

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    Official Symbol
    tsp-3
    Official Full Name
    Tetraspanin
    Primary source
    WormBase:WBGene00006629
    Locus tag
    CELE_Y39E4B.4
    See related
    AllianceGenome:WB:WBGene00006629
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See tsp-3 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    5
    Sequence:
    Chromosome: III; NC_003281.10 (13212666..13214463)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Polypeptide N-acetylgalactosaminyltransferase 5 Neighboring gene UDG domain-containing protein Neighboring gene Leishmanolysin-like peptidase Neighboring gene tRNA-Tyr Neighboring gene ncRNA Neighboring gene tRNA-Asn Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Tetraspanin
    NP_499724.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      13212666..13214463
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067323.3 → NP_499724.1  Tetraspanin [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499724.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U2K6
      Conserved Domains (1) summary
      pfam00335
      Location:9 → 208
      Tetraspannin; Tetraspanin family
    Nucleotide Protein
    Heading Accession and Version

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