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    cdr-6 CaDmium Responsive [ Caenorhabditis elegans ]

    Gene ID: 179703, updated on 9-Dec-2024

    Summary

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    Official Symbol
    cdr-6
    Official Full Name
    CaDmium Responsive
    Primary source
    WormBase:WBGene00010471
    Locus tag
    CELE_K01D12.12
    See related
    AllianceGenome:WB:WBGene00010471
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in cytoplasm. Is expressed in intestine; pharynx; and rectal gland cell. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See cdr-6 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (12412487..12413701, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene GST C-terminal domain-containing protein Neighboring gene CaDmium Responsive Neighboring gene CaDmium Responsive Neighboring gene CaDmium Responsive

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The cadmium-responsive gene, cdr-6, does not influence Caenorhabditis elegans responses to exogenous zinc. Evans KS, et al. MicroPubl Biol, 2020 Sep 14. PMID 33005884, Free PMC Article
    2. Molecular characterization of two homologs of the Caenorhabditis elegans cadmium-responsive gene cdr-1: cdr-4 and cdr-6. Dong J, et al. J Mol Biol, 2008 Feb 22. PMID 18177893, Free PMC Article
    3. Identification and characterization of a family of Caenorhabditis elegans genes that is homologous to the cadmium-responsive gene cdr-1. Dong J, et al. Biochim Biophys Acta, 2005 Jan 21. PMID 15652154
    4. Antagonistic fungal enterotoxins intersect at multiple levels with host innate immune defences. Zhang X, et al. PLoS Genet, 2021 Jun. PMID 34166401, Free PMC Article
    5. RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans. LeGendre JB, et al. J Biol Chem, 2013 Jan 25. PMID 23195953, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    CaDmium Responsive
    NP_506113.1
    • Product from WormBase gene class cdr;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      12412487..12413701 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073712.7 → NP_506113.1  CaDmium Responsive [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506113.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EET3
      Conserved Domains (2) summary
      cd03193
      Location:200 → 267
      GST_C_Metaxin; C-terminal, alpha helical domain of Metaxin and related proteins
      cd03080
      Location:46 → 118
      GST_N_Metaxin_like; GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It ...
    Nucleotide Protein
    Heading Accession and Version

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