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    F48E8.3 FAD-dependent oxidoreductase 2 FAD binding domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175751, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F48E8.3
    Official Full Name
    FAD-dependent oxidoreductase 2 FAD binding domain-containing protein
    Primary source
    WormBase:WBGene00018610
    Locus tag
    CELE_F48E8.3
    See related
    AllianceGenome:WB:WBGene00018610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable fumarate reductase (NADH) activity. Predicted to be active in cytoplasm. Is expressed in excretory cell. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F48E8.3 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    4
    Sequence:
    Chromosome: III; NC_003281.10 (5461379..5464382)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene putative serine/threonine-protein phosphatase PP2A regulatory subunit Neighboring gene MRH domain-containing protein Neighboring gene E2F-associated phosphoprotein Neighboring gene Protein lon-1;SCP domain-containing protein Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Non-proteolytic activity of 19S proteasome subunit RPT-6 regulates GATA transcription during response to infection. Olaitan AO, et al. PLoS Genet, 2018 Sep. PMID 30265660, Free PMC Article
    2. A global analysis of genetic interactions in Caenorhabditis elegans. Byrne AB, et al. J Biol, 2007. PMID 17897480, Free PMC Article
    3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables FMN binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables fumarate reductase (NADH) activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    FAD-dependent oxidoreductase 2 FAD binding domain-containing protein
    NP_498164.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      5461379..5464382
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065763.8 → NP_498164.3  FAD-dependent oxidoreductase 2 FAD binding domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498164.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q09567
      Conserved Domains (1) summary
      PTZ00306
      Location:22 → 483
      PTZ00306; NADH-dependent fumarate reductase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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