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    gpa-4 Guanine nucleotide-binding protein alpha-4 subunit [ Caenorhabditis elegans ]

    Gene ID: 176865, updated on 9-Dec-2024

    Summary

    Official Symbol
    gpa-4
    Official Full Name
    Guanine nucleotide-binding protein alpha-4 subunit
    Primary source
    WormBase:WBGene00001666
    Locus tag
    CELE_T07A9.7
    See related
    AllianceGenome:WB:WBGene00001666
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Located in non-motile cilium. Is expressed in several structures, including P lineage cell; neurons; seam cell; somatic gonad; and vulval precursor cell. Human ortholog(s) of this gene implicated in achromatopsia 4; color blindness; congenital stationary night blindness 1G; congenital stationary night blindness autosomal dominant 3; and night blindness. Orthologous to several human genes including GNAI1 (G protein subunit alpha i1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See gpa-4 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    7
    Sequence:
    Chromosome: IV; NC_003282.8 (401695..405273)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Nucleolar GTP-binding protein 1 Neighboring gene Ribosomal RNA-processing protein 8 Neighboring gene GLH-binding kinase 1 Neighboring gene ncRNA Neighboring gene ncRNA

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables G protein-coupled receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G-protein beta/gamma-subunit complex binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G-protein beta/gamma-subunit complex binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables guanyl nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cilium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of heterotrimeric G-protein complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in non-motile cilium IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Guanine nucleotide-binding protein alpha-4 subunit
    NP_499921.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      401695..405273
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067520.9NP_499921.2  Guanine nucleotide-binding protein alpha-4 subunit [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499921.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O44409, Q9BIG5
      Conserved Domains (2) summary
      cd00066
      Location:33353
      G-alpha; Alpha subunit of G proteins (guanine nucleotide binding)
      smart00275
      Location:12357
      G_alpha; G protein alpha subunit