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    tag-123 Transmembrane 9 superfamily member [ Caenorhabditis elegans ]

    Gene ID: 181096, updated on 9-Dec-2024

    Summary

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    Official Symbol
    tag-123
    Official Full Name
    Transmembrane 9 superfamily member
    Primary source
    WormBase:WBGene00006472
    Locus tag
    CELE_F08F1.7
    See related
    AllianceGenome:WB:WBGene00006472
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in protein localization to membrane. Predicted to be active in membrane. Is expressed in several structures, including head; hypodermis; intestine; pharyngeal muscle cell; and reproductive system. Orthologous to human TM9SF2 (transmembrane 9 superfamily member 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See tag-123 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Sequence:
    Chromosome: X; NC_003284.9 (8418650..8422055, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene C6 domain-containing protein Neighboring gene Cell death abnormality protein 8 Neighboring gene Saposin B-type domain-containing protein Neighboring gene ncRNA Neighboring gene tRNA-Leu Neighboring gene ncRNA Neighboring gene tRNA-Leu Neighboring gene ncRNA Neighboring gene Thymosin beta Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MRG-1, an autosome-associated protein, silences X-linked genes and protects germline immortality in Caenorhabditis elegans. Takasaki T, et al. Development, 2007 Feb. PMID 17215300, Free PMC Article
    2. MES-4: an autosome-associated histone methyltransferase that participates in silencing the X chromosomes in the C. elegans germ line. Bender LB, et al. Development, 2006 Oct. PMID 16968818, Free PMC Article
    3. Germline Maintenance Through the Multifaceted Activities of GLH/Vasa in Caenorhabditis elegans P Granules. Marnik EA, et al. Genetics, 2019 Nov. PMID 31506335, Free PMC Article
    4. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
    5. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in protein localization to membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Transmembrane 9 superfamily member
    NP_509429.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      8418650..8422055 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077028.8 → NP_509429.1  Transmembrane 9 superfamily member [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509429.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17388
      Conserved Domains (1) summary
      pfam02990
      Location:60 → 611
      EMP70; Endomembrane protein 70
    Nucleotide Protein
    Heading Accession and Version

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