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    znf-706 4F5 domain-containing protein;Small EDRK-rich factor-like N-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 177731, updated on 9-Dec-2024

    Summary

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    Official Symbol
    znf-706
    Official Full Name
    4F5 domain-containing protein;Small EDRK-rich factor-like N-terminal domain-containing protein
    Primary source
    WormBase:WBGene00007223
    Locus tag
    CELE_C01F6.9
    See related
    AllianceGenome:WB:WBGene00007223
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in cytoplasm and nucleus. Orthologous to human ZNF706 (zinc finger protein 706). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See znf-706 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (9095754..9096231, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Octanoyl-[acyl-carrier-protein]:protein N-octanoyltransferase LIPT2, mitochondrial Neighboring gene Large ribosomal subunit protein mL42 Neighboring gene Methylosome subunit pICln Neighboring gene ncRNA Neighboring gene VWFA domain-containing protein Neighboring gene AMP-activated protein kinase glycogen-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    3. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    4. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    4F5 domain-containing protein;Small EDRK-rich factor-like N-terminal domain-containing protein
    NP_001294066.1
    • Partially confirmed by transcript evidence
    NP_501583.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9095754..9096231 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069182.4 → NP_501583.1  Small EDRK-rich factor-like N-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501583.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EDA6

    2. NM_001307137.1 → NP_001294066.1  4F5 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294066.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X5M911
    Nucleotide Protein
    Heading Accession and Version

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