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    pqn-68 D-aminoacyl-tRNA deacylase [ Caenorhabditis elegans ]

    Gene ID: 188555, updated on 9-Dec-2024

    Summary

    Official Symbol
    pqn-68
    Official Full Name
    D-aminoacyl-tRNA deacylase
    Primary source
    WormBase:WBGene00004151
    Locus tag
    CELE_T16G1.10
    See related
    AllianceGenome:WB:WBGene00004151
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable D-tyrosyl-tRNA(Tyr) deacylase activity. Predicted to be involved in tRNA metabolic process. Predicted to be active in cytoplasm. Orthologous to human DTD1 (D-aminoacyl-tRNA deacylase 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See pqn-68 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (12952636..12953208)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene EIF3k Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene Eukaryotic translation initiation factor 3 subunit K Neighboring gene Rhodanese domain-containing protein Neighboring gene ncRNA Neighboring gene Transport and Golgi organization protein 2 homolog

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables D-aminoacyl-tRNA deacylase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables D-tyrosyl-tRNA(Tyr) deacylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables aminoacyl-tRNA editing activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables tRNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in aminoacyl-tRNA metabolism involved in translational fidelity IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in tRNA metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in tRNA metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    D-aminoacyl-tRNA deacylase
    NP_001041168.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      12952636..12953208
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001047703.2NP_001041168.1  D-aminoacyl-tRNA deacylase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001041168.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XUP4
      Conserved Domains (1) summary
      cl00253
      Location:1150
      Dtyr_deacylase; D-Tyrosyl-tRNAtyr deacylases; a class of tRNA-dependent hydrolases which are capable of hydrolyzing the ester bond of D-Tyrosyl-tRNA reducing the level of cellular D-Tyrosine while recycling the peptidyl-tRNA; found in bacteria and in eukaryotes but not ...

    RNA

    1. NR_003175.1 RNA Sequence

      Status: REVIEWED