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    K04G7.1 Integrase zinc-binding domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 176004, updated on 9-Dec-2024

    Summary

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    Official Symbol
    K04G7.1
    Official Full Name
    Integrase zinc-binding domain-containing protein
    Primary source
    WormBase:WBGene00019400
    Locus tag
    CELE_K04G7.1
    See related
    AllianceGenome:WB:WBGene00019400
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in body wall musculature and head neurons. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See K04G7.1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    8
    Sequence:
    Chromosome: III; NC_003281.10 (7162712..7164960)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene U1 small nuclear ribonucleoprotein 70 kDa Neighboring gene Pre-mRNA-splicing factor syf-2 Neighboring gene long-chain-fatty-acid--CoA ligase Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein interaction mapping in C. elegans using proteins involved in vulval development. Walhout AJ, et al. Science, 2000 Jan 7. PMID 10615043
    2. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
    3. A global analysis of genetic interactions in Caenorhabditis elegans. Byrne AB, et al. J Biol, 2007. PMID 17897480, Free PMC Article
    4. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
    5. SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans. Robert VJ, et al. Development, 2023 Nov 1. PMID 37818613, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Integrase zinc-binding domain-containing protein
    NP_498567.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      7162712..7164960
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_066166.6 → NP_498567.1  Integrase zinc-binding domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498567.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q21234
      Conserved Domains (1) summary
      pfam17921
      Location:109 → 166
      Integrase_H2C2; Integrase zinc binding domain
    Nucleotide Protein
    Heading Accession and Version

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