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    Y116A8C.10 Rab-like protein 3 [ Caenorhabditis elegans ]

    Gene ID: 3565140, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y116A8C.10
    Official Full Name
    Rab-like protein 3
    Primary source
    WormBase:WBGene00013790
    Locus tag
    CELE_Y116A8C.10
    See related
    AllianceGenome:WB:WBGene00013790
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable GTPase activity. Predicted to be involved in intracellular protein transport. Predicted to be active in endomembrane system. Human ortholog(s) of this gene implicated in pancreatic cancer. Orthologous to human RABL3 (RAB, member of RAS oncogene family like 3). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y116A8C.10 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    5
    Sequence:
    Chromosome: IV; NC_003282.8 (16934266..16939101, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Ephrin_rec_like domain-containing protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene ABC2_membrane domain-containing protein;Transmembrane protein 185B Neighboring gene ADP-ribosylation factor 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in endomembrane system IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Rab-like protein 3
    NP_001122804.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      16934266..16939101 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001129332.3 → NP_001122804.1  Rab-like protein 3 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001122804.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D0FK02
      Conserved Domains (1) summary
      cl21455
      Location:10 → 195
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    RNA

    1. NR_003159.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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