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    Y45F10A.7 DEP domain-containing protein;DUF547 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178318, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y45F10A.7
    Official Full Name
    DEP domain-containing protein;DUF547 domain-containing protein
    Primary source
    WormBase:WBGene00012869
    Locus tag
    CELE_Y45F10A.7
    See related
    AllianceGenome:WB:WBGene00012869
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in intracellular signal transduction. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y45F10A.7 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    10
    Sequence:
    Chromosome: IV; NC_003282.8 (13492571..13497255)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Rab-GAP TBC domain-containing protein Neighboring gene Glycoprotein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Neuropeptide-Like Protein Neighboring gene putative selenide, water dikinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DEP domain-containing protein;DUF547 domain-containing protein
    NP_001076732.1
    • Confirmed by transcript evidence
    NP_001076733.1
    • Partially confirmed by transcript evidence
    NP_001255747.1
    • Confirmed by transcript evidence
    NP_001255748.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      13492571..13497255
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001083263.7 → NP_001076732.1  DEP domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001076732.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O62456
      Conserved Domains (3) summary
      cd03027
      Location:17 → 89
      GRX_DEP; Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) ...
      cd04371
      Location:146 → 221
      DEP; DEP domain, named after Dishevelled, Egl-10, and Pleckstrin, where this domain was first discovered. The function of this domain is still not clear, but it is believed to be important for the membrane association of the signaling proteins in which it is ...
      pfam04784
      Location:305 → 424
      DUF547; Protein of unknown function, DUF547

    2. NM_001268818.3 → NP_001255747.1  DUF547 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255747.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D3NQ95
      Conserved Domains (1) summary
      pfam04784
      Location:125 → 244
      DUF547; Protein of unknown function, DUF547

    3. NM_001083264.6 → NP_001076733.1  DUF547 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001076733.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q08I44
      Conserved Domains (1) summary
      pfam04784
      Location:182 → 301
      DUF547; Protein of unknown function, DUF547

    4. NM_001268819.3 → NP_001255748.1  DUF547 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255748.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D3NQ96
      Conserved Domains (1) summary
      pfam04784
      Location:93 → 212
      DUF547; Protein of unknown function, DUF547
    Nucleotide Protein
    Heading Accession and Version

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