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    lips-5 Lipase [ Caenorhabditis elegans ]

    Gene ID: 188437, updated on 9-Dec-2024

    Summary

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    Official Symbol
    lips-5
    Official Full Name
    Lipase
    Primary source
    WormBase:WBGene00011725
    Locus tag
    CELE_T12A7.4
    See related
    AllianceGenome:WB:WBGene00011725
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable lipase activity. Predicted to be involved in lipid catabolic process. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See lips-5 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    9
    Sequence:
    Chromosome: IV; NC_003282.8 (11768621..11773742, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene BAR domain-containing protein Neighboring gene EGF-like domain-containing protein Neighboring gene ncRNA Neighboring gene LiPocalin-Related protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics and functional study of lipid metabolic genes in Caenorhabditis elegans. Zhang Y, et al. BMC Genomics, 2013 Mar 12. PMID 23496871, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables lipase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in lipid catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in lipid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Lipase
    NP_001076706.1
    • Confirmed by transcript evidence
    NP_001076707.1
    • Confirmed by transcript evidence
    NP_001255588.1
    • Confirmed by transcript evidence
    NP_001255589.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      11768621..11773742 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001083237.3 → NP_001076706.1  Lipase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001076706.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q067X9
      Conserved Domains (1) summary
      pfam01674
      Location:68 → 320
      Lipase_2; Lipase (class 2)

    2. NM_001268660.3 → NP_001255589.1  Lipase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255589.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2X1
      Conserved Domains (1) summary
      pfam01674
      Location:68 → 334
      Lipase_2; Lipase (class 2)

    3. NM_001268659.2 → NP_001255588.1  Lipase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255588.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2X2
      Conserved Domains (1) summary
      pfam01674
      Location:68 → 331
      Lipase_2; Lipase (class 2)

    4. NM_001083238.2 → NP_001076707.1  Lipase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001076707.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q067X8
      Conserved Domains (1) summary
      cl21494
      Location:1 → 36
      Abhydrolase; alpha/beta hydrolases
    Nucleotide Protein
    Heading Accession and Version

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