U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    lido-17 Lon proteolytic domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 174487, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    lido-17
    Official Full Name
    Lon proteolytic domain-containing protein
    Primary source
    WormBase:WBGene00007378
    Locus tag
    CELE_C06C3.8
    See related
    AllianceGenome:WB:WBGene00007378
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable ATP-dependent peptidase activity and serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See lido-17 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    12
    Sequence:
    Chromosome: II; NC_003280.10 (9386538..9392824, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class H Neighboring gene Upf2 domain-containing protein Neighboring gene pseudo Neighboring gene Protein kinase domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ATP-dependent peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Lon proteolytic domain-containing protein
    NP_001254207.1
    • Confirmed by transcript evidence
    NP_001254208.1
    • Confirmed by transcript evidence
    NP_001364522.1
    • Partially confirmed by transcript evidence
    NP_001364523.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      9386538..9392824 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001267278.3 → NP_001254207.1  Lon proteolytic domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001254207.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F5GU78
      Conserved Domains (2) summary
      TIGR00764
      Location:38 → 128
      lon_rel; lon-related putative ATP-dependent protease
      pfam03353
      Location:300 → 570
      Lin-8; Ras-mediated vulval-induction antagonist

    2. NM_001377835.3 → NP_001364523.1  Lon proteolytic domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9MMD3
      Conserved Domains (2) summary
      PRK13765
      Location:42 → 131
      PRK13765; ATP-dependent protease Lon; Provisional
      pfam03353
      Location:289 → 559
      Lin-8; Ras-mediated vulval-induction antagonist

    3. NM_001377834.2 → NP_001364522.1  Lon proteolytic domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9MRR3
      Conserved Domains (2) summary
      PRK13765
      Location:93 → 182
      PRK13765; ATP-dependent protease Lon; Provisional
      pfam03353
      Location:351 → 621
      Lin-8; Ras-mediated vulval-induction antagonist

    4. NM_001267279.3 → NP_001254208.1  Lon proteolytic domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001254208.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F5GU79
      Conserved Domains (1) summary
      pfam03353
      Location:50 → 320
      Lin-8; Ras-mediated vulval-induction antagonist
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools